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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941661.1_cds_XP_016485428.1_76357
CDS Infomation

[gene=LOC107805846] [db_xref=GeneID:107805846] [protein=F-box/LRR-repeat protein 15-like] [protein_id=XP_016485428.1] [location=complement(join(117204..117284,117366..117452,118883..118946,119050..119513,120648..120846,120931..121091,121264..121416,122904..123074,123168..123267,123377..123465,123556..123654,123737..124007,124082..124279,124358..124457,125307..125439,125543..125723,126871..126992))] [gbkey=CDS]
Sequence

ATGTTGAATGTTAATTTAAATTTAGGGTTGAGTGAAGAGGCTTCTTCGTCCTCAACAGTG
CAGAAAGAGGATCCTGATCGTGATTCCTGTAGTAAAAGGCCCAAAGTTAACTCATTTTCG
CTGGATTGGGACAACCACTTGTTGCAGGAGACGAGTTACCTTTGTCCTATGAACGAGGGT
GGTGGAGATATGAGTTTGTCCAACTTTCTTGATGCTACAGATGATAAGGGGAAAGATATT
GGCATCTCAAAAATGGAGGATTTAGATGTGCGGATGGATCTTACTGATGACTTGTTGCAT
ATGGTATTCTCTTTCTTGGACCATATTGATCTCTGTCGAGCTGCAAGTGTTTGTAGGCAG
TGGAGAGCAGCTAGCTCTCATGAAGATTTTTGGCGGTATCTCAATTTTGAGAACAAGCAG
ATTTCCTCAGATCAATTTGAGGATATGTGTCGACGATACCCAAATGCAACAGCTGTTAAT
TTATATGGAACTCTTAATATTCATCCACTAGCAATGAAAGCGGTTTCCTCATTAAGAAAT
CTTGAAGCTCTGACTTTGGGTAGAGGTCAGCTGGGAGAAACATTTTTCCAGGCCTTAACG
GACTGCCATATGTTGAAGAGCTTGACTGTTAATGATGCTACTCTTGGAAATGGTATTCAG
GAGATACCTATTTATCATGACAGATTGCGTCTTCTGCAGCTCGTGAAGTGTCGTGTGCTT
CGAGTTTCTGTCAGGTGTCCGCAGCTTGAAACGTTGTCACTCAAGCGCAGTAGCATGCCA
CATGCCGTGCTTAATTGCCCACTTTTACATGACCTTGATATAGCTTCATGTCACAAGCTT
TCAGATGCCGCTATTCGCTCAGCAGCAACAGCATGCCCTCTTTTAGAGTCTTTGGATATG
TCAAATTGTTCATGTGTTAGTGATGAAACACTGCGAGAAATAGCTCAAACTTGTGCAAGT
CTTCGAGTTCTAGATGCTTCATACTGCCCTAACATTTCTCTTGAGTCTGTGAGGCTGGTT
ATGTTGACTGTTCTCAAGCTTCACAGTTGTGAGGGCATAACATCAGCTTCCATGGCTGCC
ATAGCCCATAGCTATATGTTAGAGGTTCTAGAGCTTGATAATTGCAGTTTATTAACATCA
GTGTCCTTGGATCTTCCTCGCCTTCAGAACATCAGACTCGTACATTGTCGCAAGTTTATT
GACCTCAACTTGCATAGTGGCATGTTATCATCAATTACTGTTTCTAATTGCCCACTGCTC
CAACGAATCAATATAACTTCAAGTGCACTCAAAAAATTAGTTTTGCAGAAGCAAGAAAGC
TTGACAACAATTACATTGCAGTGCCTGAATTTGCTAGAAGTAGACCTTACTGAGTGCGAA
TCGCTCACCAATTCTATCTGTGAAGTTTTCAGCGATGGTGGTGGCTGTCCTGTGCTTAAA
TCCTTAATTCTAGATAATTGCGAGAGCTTGACAGCTGTGGCTTTCTGCAGCACTTCTTTG
GTTTCTCTCTCACTTGCTGGTTGCCGTGCTTTAATTTCTCTTCAACTCAGGTGCTCTTAT
CTTGAGCAAGTCTCTTTAGATGGTTGTGATCATCTTGAAATAGCATCTTTTTCCCCAGTT
GGTCTTCGGTCACTTAATCTCGGTATATGCCCCAAAATGAGTGTGCTCAATATCGAAGCT
CCACAAATGGCTTCACTTGAGCTGAAGGGCTGTGGTGTGCTATCTGAAGCATCCATTAAT
TGCCCTCTCTTGACCTCTTTTGATGCTTCATTCTGCAGCCAACTCAAGGATGACTGTTTA
TCTGCCACGACCTCATCATGCCCCCTTATCGAGTCATTAATACTAATGTCATGTCCATCT
GTTGGCTGTGATGGACTGCTCTCTTTGCATTCCCTCCCAAACTTGACCTACCTTGATCTA
TCCTACACATTTTTGGTTAACTTGCAGCCTGTTTATGAATCATGCTTGCGATTAAAGGTC
CTAAAATTGCAAGCATGCAAGTATCTCACCGATACATCTTTGGAACCTCTTTACAAAGAC
AATGCTCTCCCAGCCCTTTGTGAGTTGGATTTGTCATATGGGACGCTGTGCCAATCAGCC
ATTGAGGAATTGCTTGCTTGCTGCACACATTTGACTCATGTCAGCTTGAATGGATGTGTT
AATATGCATGATTTGAACTGGGGATTTACTGGTGACCAACGGTCGCGTATACCCAGTGTT
GGTATAGCACCTCATGGATCTTCCTTGGTAGAACAACATTTTCCAAATGAACAACCAAAG
CGTTTGCTAGAGAACCTAAATTGTGTAGGTTGCCCAAATATAAAAAAGGTGGTTATTCCG
ATGGCACAAGGTTTCCTTTTGTCATCATTAAACCTTTCCCTGTCTGCGAATTTGAAGGAG
GTTGATATAGCTTGTTACAACCTGTGCTTTCTCAATTTGAGCAACTGTTGTTCACTGGAA
TCGTTGCAACTGGAATGTCCAAGATTGAGTAGCCTCTTTCTTCAGTCCTGCAACATTGAC
GAGGAAGCTGTTGAAGCTGCAATTTCACGATGTACCATGCTTGAGACACTGGATGTACGC
TTTTGTCCCAAGATTTGCCCACCGAGCATGGGGAGGTTACGTGCTGCATGTCCCAGCTTA
AAACGCATCTTTAGCAGCTTAGTCCCATCGTGA

Peptide Sequence

PEP ID

XP_016485428.1
PEP Infomation

PREDICTED: F-box/LRR-repeat protein 15-like [Nicotiana tabacum]
Sequence

MLNVNLNLGLSEEASSSSTVQKEDPDRDSCSKRPKVNSFSLDWDNHLLQETSYLCPMNEG
GGDMSLSNFLDATDDKGKDIGISKMEDLDVRMDLTDDLLHMVFSFLDHIDLCRAASVCRQ
WRAASSHEDFWRYLNFENKQISSDQFEDMCRRYPNATAVNLYGTLNIHPLAMKAVSSLRN
LEALTLGRGQLGETFFQALTDCHMLKSLTVNDATLGNGIQEIPIYHDRLRLLQLVKCRVL
RVSVRCPQLETLSLKRSSMPHAVLNCPLLHDLDIASCHKLSDAAIRSAATACPLLESLDM
SNCSCVSDETLREIAQTCASLRVLDASYCPNISLESVRLVMLTVLKLHSCEGITSASMAA
IAHSYMLEVLELDNCSLLTSVSLDLPRLQNIRLVHCRKFIDLNLHSGMLSSITVSNCPLL
QRINITSSALKKLVLQKQESLTTITLQCLNLLEVDLTECESLTNSICEVFSDGGGCPVLK
SLILDNCESLTAVAFCSTSLVSLSLAGCRALISLQLRCSYLEQVSLDGCDHLEIASFSPV
GLRSLNLGICPKMSVLNIEAPQMASLELKGCGVLSEASINCPLLTSFDASFCSQLKDDCL
SATTSSCPLIESLILMSCPSVGCDGLLSLHSLPNLTYLDLSYTFLVNLQPVYESCLRLKV
LKLQACKYLTDTSLEPLYKDNALPALCELDLSYGTLCQSAIEELLACCTHLTHVSLNGCV
NMHDLNWGFTGDQRSRIPSVGIAPHGSSLVEQHFPNEQPKRLLENLNCVGCPNIKKVVIP
MAQGFLLSSLNLSLSANLKEVDIACYNLCFLNLSNCCSLESLQLECPRLSSLFLQSCNID
EEAVEAAISRCTMLETLDVRFCPKICPPSMGRLRAACPSLKRIFSSLVPS

Transcript Sequence

Gene sequence data has not been registered.